=================
API Documentation
=================

This section contains an overview of the ``mdaencore`` API.

Modules
-------

.. toctree::
   :maxdepth: 1

   encore/similarity
   encore/clustering
   encore/dimensionality_reduction
   encore/confdistmatrix
   encore/covariance
   encore/bootstrap
   encore/utils
   

References
----------

.. footbibliography::